dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003252_478|CGC2
Gene ID: MGYG000003252_05026
Location and strand information: 44301 - 45725 (-)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.0862
Protein molecular weight: 53035.33
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_478|CGC2
Gene ID: MGYG000003252_05027
Location and strand information: 45931 - 50253 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000003252_478|CGC2
Gene ID: MGYG000003252_05028
Location and strand information: 50163 - 50573 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003252_478|CGC2
Gene ID: MGYG000003252_05029
Location and strand information: 50642 - 52207 (-)
Family: PL9|PL9_1
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.7448
Protein molecular weight: 56935.6
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_478|CGC2
Gene ID: MGYG000003252_05030
Location and strand information: 52438 - 54090 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003252_478|CGC2
Gene ID: MGYG000003252_05031
Location and strand information: 54181 - 54957 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003252_478|CGC2
Gene ID: MGYG000003252_05032
Location and strand information: 55090 - 58155 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000003252_478|CGC2
Gene ID: MGYG000003252_05033
Location and strand information: 58192 - 59718 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003252_478|CGC2
Gene ID: MGYG000003252_05034
Location and strand information: 59733 - 61703 (+)
Family: CBM2|PL11_1
Protein type: CAZyme
Protein description: Rhamnogalacturonan endolyase YesW
Protein isoelectric point: 6.1744
Protein molecular weight: 73394.17
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_478|CGC2
Gene ID: MGYG000003252_05035
Location and strand information: 61731 - 63356 (+)
Family: GH43_10|GH43
Protein type: CAZyme
Protein description: Non-reducing end alpha-L-arabinofuranosidase BoGH43B
Protein isoelectric point: 6.5539
Protein molecular weight: 60756.91
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_478|CGC2
Gene ID: MGYG000003252_05036
Location and strand information: 63388 - 64590 (+)
Family: GH88
Protein type: CAZyme
Protein description: Unsaturated chondroitin disaccharide hydrolase
Protein isoelectric point: 6.4402
Protein molecular weight: 45137.13
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_478|CGC2
Gene ID: MGYG000003252_05037
Location and strand information: 64580 - 65794 (+)
Family: GH154
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.9704
Protein molecular weight: 45019.64
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_478|CGC2
Gene ID: MGYG000003252_05038
Location and strand information: 65799 - 68360 (+)
Family: PL26
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.2909
Protein molecular weight: 96615.46
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_478|CGC2
Gene ID: MGYG000003252_05039
Location and strand information: 68380 - 70761 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase BoGH2A
Protein isoelectric point: 8.5574
Protein molecular weight: 90241.24
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_478|CGC2
Gene ID: MGYG000003252_05040
Location and strand information: 70758 - 71837 (+)
Family: GH43_19
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.2349
Protein molecular weight: 41463.57
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000003252_05026	GH105_e35\|3.2.1.172	pectin
MGYG000003252_05029	PL9_e26\|4.2.2.23	pectin
MGYG000003252_05034	CBM2_e72\|4.2.2.23
MGYG000003252_05035	GH43_e234
MGYG000003252_05036	GH88_e23\|3.2.1.-	hostglycan
MGYG000003252_05037
MGYG000003252_05038	PL26_e1\|4.2.2.24	pectin
MGYG000003252_05039	GH2_e122
MGYG000003252_05040

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003252_05026	hypothetical protein	CAZyme	44301	45725	-	GH105
MGYG000003252_05027	Sensor histidine kinase RcsC	TF	45931	50253	+	HTH_AraC
MGYG000003252_05028	hypothetical protein	null	50163	50573	-	No domain
MGYG000003252_05029	hypothetical protein	CAZyme	50642	52207	-	PL9\| PL9_1
MGYG000003252_05030	hypothetical protein	null	52438	54090	+	Mfa_like_1
MGYG000003252_05031	hypothetical protein	null	54181	54957	+	No domain
MGYG000003252_05032	TonB-dependent receptor SusC	TC	55090	58155	+	1.B.14.6.1
MGYG000003252_05033	hypothetical protein	null	58192	59718	+	SusD-like_3\| SusD_RagB
MGYG000003252_05034	Rhamnogalacturonan endolyase YesW	CAZyme	59733	61703	+	CBM2\| PL11_1
MGYG000003252_05035	Non-reducing end alpha-L-arabinofuranosidase BoGH43B	CAZyme	61731	63356	+	GH43_10\| GH43
MGYG000003252_05036	Unsaturated chondroitin disaccharide hydrolase	CAZyme	63388	64590	+	GH88
MGYG000003252_05037	hypothetical protein	CAZyme	64580	65794	+	GH154
MGYG000003252_05038	hypothetical protein	CAZyme	65799	68360	+	PL26
MGYG000003252_05039	Beta-galactosidase BoGH2A	CAZyme	68380	70761	+	GH2
MGYG000003252_05040	hypothetical protein	CAZyme	70758	71837	+	GH43_19
Protein ID	Protein Name	Type	Start	End	Strand	Signature